Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system export apparatus subunit sctu | EYR26_RS02810 | P35652 | Negative | 573034 - 574107 | 39090.0 |
| hrpb1 family type iii secretion system apparatus protein | EYR26_RS02815 | Not Available | Positive | 574322 - 574777 | 16009.3 |
| type iii secretion protein hrpb2 | EYR26_RS02820 | Not Available | Positive | 574811 - 575203 | 13684.8 |
| type iii secretion system inner membrane ring lipoprotein sctj | EYR26_RS02825 | P80152 | Positive | 575205 - 575969 | 27459.9 |
| type iii secretion protein hrpb4 | EYR26_RS02830 | Not Available | Positive | 575977 - 576606 | 22341.0 |
| type iii secretion system stator protein sctl | EYR26_RS02835 | Not Available | Positive | 576591 - 577292 | 25278.7 |
| type iii secretion system atpase sctn | EYR26_RS02840 | P80153 | Positive | 577282 - 578610 | 47656.6 |
| type iii secretion protein hrpb7 | EYR26_RS02845 | Not Available | Positive | 578603 - 579112 | 18816.1 |
| type iii secretion system export apparatus subunit sctt | EYR26_RS02850 | Not Available | Positive | 579109 - 579939 | 29079.1 |
| type iii secretion system outer membrane ring subunit sctc | EYR26_RS02855 | P80151 | Positive | 580022 - 581845 | 64092.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

