Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cest family type iii secretion system chaperone | EYR26_RS02760 | Not Available | Negative | 565622 - 566092 | 17701.1 |
| hrpe family protein | EYR26_RS02765 | Not Available | Negative | 566147 - 566428 | 9598.32 |
| hrpd6 family protein | EYR26_RS02770 | Not Available | Negative | 566509 - 566751 | 8711.29 |
| hrpd5 family protein | EYR26_RS02775 | Not Available | Negative | 566761 - 567699 | 33372.5 |
| hypothetical protein | EYR26_RS02780 | Not Available | Negative | 567696 - 568523 | 30403.8 |
| type iii secretion system export apparatus subunit scts | EYR26_RS02785 | Not Available | Negative | 568520 - 568780 | 8944.25 |
| type iii secretion system export apparatus subunit sctr | EYR26_RS02790 | P37828 | Negative | 568785 - 569429 | 23519.8 |
| type iii secretion system cytoplasmic ring protein sctq | EYR26_RS02795 | Not Available | Negative | 569416 - 570369 | 33147.1 |
| type iii secretion system protein sctp | EYR26_RS02800 | Not Available | Negative | 570462 - 571103 | 23820.4 |
| fhipep family type iii secretion protein | EYR26_RS02805 | P80150 | Negative | 571103 - 573025 | 69172.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

