Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| comf family protein | EYR26_RS02710 | Not Available | Positive | 553785 - 554510 | 26604.7 |
| 4-hydroxybenzoate octaprenyltransferase | EYR26_RS02715 | Q8PQD5 | Negative | 554767 - 555672 | 33459.2 |
| Trna-arg | Not Available | Not Available | Positive | 556135 - 556211 | Not Available |
| hypothetical protein | EYR26_RS24665 | Not Available | Negative | 556389 - 556514 | 4235.05 |
| type iii secretion system effector xopae | EYR26_RS02730 | Not Available | Negative | 556625 - 558097 | 54185.5 |
| hypothetical protein | EYR26_RS23530 | Not Available | Negative | 558666 - 558803 | 4988.19 |
| hrpf/nolx family t3ss translocon protein | EYR26_RS02740 | P55711 | Negative | 559162 - 561582 | 86468.6 |
| hpa3 family type iii secretion system protein | EYR26_RS02745 | Not Available | Positive | 562408 - 562854 | 15704.2 |
| type iii secretion system effector xopf1 | EYR26_RS02750 | Not Available | Positive | 562851 - 564851 | 70147.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 564957 - 565033 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

