Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-hydroxylating dioxygenase subunit alpha | EYR26_RS02560 | P12609 | Negative | 526516 - 527592 | 40244.6 |
| coa transferase subunit a | EYR26_RS02565 | Q8VPF3 | Positive | 527844 - 528707 | 31298.4 |
| coa-transferase subunit beta | EYR26_RS02570 | Q8VPF2 | Positive | 528704 - 529492 | 27241.4 |
| 3-oxoadipyl-coa thiolase | EYR26_RS02575 | Q9I6R0 | Positive | 529489 - 530697 | 41634.9 |
| protocatechuate 3,4-dioxygenase subunit beta | EYR26_RS02580 | P15110 | Positive | 530776 - 531513 | 27537.4 |
| protocatechuate 3,4-dioxygenase subunit alpha | EYR26_RS02585 | P15109 | Positive | 531518 - 532081 | 20046.8 |
| Ncrna_class:other | Not Available | Not Available | Positive | 532354 - 532430 | Not Available |
| 3-carboxy-cis,cis-muconate cycloisomerase | EYR26_RS02595 | Q9I6Q8 | Positive | 532581 - 533933 | 47030.6 |
| 3-oxoadipate enol-lactonase | EYR26_RS02600 | P00632 | Positive | 533944 - 534726 | 28442.8 |
| 4-carboxymuconolactone decarboxylase | EYR26_RS02605 | P20370 | Positive | 534752 - 535165 | 15129.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

