Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system effector avirulence protein avrbs3 | EYR26_RS02460 | B2SU53 | Negative | 503731 - 507633 | 136494.0 |
| phage late control d family protein | EYR26_RS02465 | Not Available | Negative | 507690 - 508208 | 19179.2 |
| dipeptidase | EYR26_RS24165 | P62590 | Positive | 508544 - 509524 | 34641.4 |
| dihydroxy-acid dehydratase | EYR26_RS02475 | Q2NY76 | Negative | 509757 - 511595 | 64904.6 |
| ykgj family cysteine cluster protein | EYR26_RS02480 | P0AFT9 | Positive | 511770 - 512036 | 9002.17 |
| gamma carbonic anhydrase family protein | EYR26_RS02485 | P0A9W9 | Negative | 512062 - 512607 | 19217.1 |
| mfs transporter | EYR26_RS02490 | E8ZB61 | Positive | 513083 - 514393 | 45554.4 |
| hd-gyp domain-containing protein | EYR26_RS02495 | Q9HWS0 | Positive | 514532 - 515791 | 46312.6 |
| hypothetical protein | EYR26_RS23520 | Not Available | Negative | 516027 - 516200 | 6190.39 |
| marr family winged helix-turn-helix transcriptional regulator | EYR26_RS02505 | Not Available | Positive | 516221 - 516751 | 19391.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

