Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | EYR26_RS02255 | P48632 | Positive | 456981 - 459194 | 81117.2 |
| patatin-like phospholipase family protein | EYR26_RS02260 | O34731 | Negative | 459706 - 460743 | 36011.4 |
| amidohydrolase | EYR26_RS02265 | P58156 | Positive | 460879 - 462291 | 50316.4 |
| tigr00266 family protein | EYR26_RS02270 | Not Available | Negative | 462320 - 463330 | 35168.9 |
| abc transporter atp-binding protein | EYR26_RS02275 | O31723 | Negative | 463520 - 464365 | 30387.0 |
| acyl-coa desaturase | EYR26_RS02280 | Not Available | Positive | 464525 - 465730 | 45352.5 |
| ef-hand domain-containing protein | EYR26_RS02285 | Not Available | Positive | 465783 - 466115 | 12300.5 |
| atp-binding cassette domain-containing protein | EYR26_RS02290 | Q45460 | Positive | 466164 - 466901 | 26514.2 |
| glycine betaine abc transporter substrate-binding protein | EYR26_RS02295 | Q8ZPK3 | Positive | 466898 - 468370 | 52920.8 |
| aminotransferase class v-fold plp-dependent enzyme | EYR26_RS02300 | Not Available | Negative | 468657 - 469838 | 42348.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

