Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport periplasmic protein lpta | EYR26_RS16210 | P0ADV3 | Positive | 3404771 - 3405331 | 19774.6 |
| lps export abc transporter atp-binding protein | EYR26_RS16215 | P33982 | Positive | 3405331 - 3406050 | 26145.1 |
| rna polymerase factor sigma-54 | EYR26_RS16220 | P77998 | Positive | 3406133 - 3407530 | 50625.0 |
| ribosome hibernation-promoting factor, hpf/yfia family | EYR26_RS16225 | P17160 | Positive | 3407618 - 3407935 | 12080.5 |
| pts sugar transporter subunit iia | EYR26_RS16230 | P30335 | Positive | 3407957 - 3408415 | 16161.4 |
| hpr(ser) kinase/phosphatase | EYR26_RS16235 | Q4UX46 | Positive | 3408412 - 3409362 | 35156.5 |
| rnase adapter rapz | EYR26_RS16240 | Q2P693 | Positive | 3409359 - 3410231 | 32954.2 |
| pts sugar transporter subunit iia | EYR26_RS16245 | Not Available | Positive | 3410759 - 3411151 | 13565.6 |
| hpr family phosphocarrier protein | EYR26_RS16250 | Q9PDH6 | Positive | 3411144 - 3411413 | 9675.62 |
| phosphoenolpyruvate--protein phosphotransferase | EYR26_RS16255 | P23536 | Positive | 3411472 - 3413202 | 63225.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

