Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2238 domain-containing protein | EYR26_RS16155 | Not Available | Positive | 3396782 - 3397399 | 22867.1 |
| phosphoribosylglycinamide formyltransferase | EYR26_RS16160 | P08179 | Positive | 3397386 - 3398054 | 23770.7 |
| duf3108 domain-containing protein | EYR26_RS16165 | Not Available | Positive | 3398120 - 3398947 | 29897.4 |
| duf3108 domain-containing protein | EYR26_RS16170 | Not Available | Positive | 3398951 - 3399634 | 24957.1 |
| hypothetical protein | EYR26_RS16175 | Not Available | Negative | 3400507 - 3400830 | 12244.8 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | EYR26_RS16180 | Q3BQX2 | Negative | 3400827 - 3402101 | 44363.8 |
| bola family protein | EYR26_RS16190 | P73055 | Negative | 3402341 - 3402568 | 8022.7 |
| kpsf/gutq family sugar-phosphate isomerase | EYR26_RS16195 | Q9HVW0 | Positive | 3402623 - 3403624 | 34941.1 |
| had family hydrolase | EYR26_RS16200 | Q8ZB47 | Positive | 3403673 - 3404221 | 19645.7 |
| lps export abc transporter periplasmic protein lptc | EYR26_RS16205 | Not Available | Positive | 3404218 - 3404793 | 21151.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

