Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yggs family pyridoxal phosphate-dependent enzyme | EYR26_RS16005 | P67082 | Positive | 3372556 - 3373248 | 24683.7 |
| pyrroline-5-carboxylate reductase | EYR26_RS16010 | P22008 | Positive | 3373292 - 3374152 | 29345.9 |
| hu family dna-binding protein | EYR26_RS16015 | Not Available | Positive | 3374709 - 3375134 | 14701.5 |
| m23 family metallopeptidase | EYR26_RS16020 | Not Available | Positive | 3375240 - 3375881 | 22997.8 |
| duf3861 family protein | EYR26_RS16025 | Not Available | Positive | 3375939 - 3376280 | 12895.4 |
| hypothetical protein | EYR26_RS16030 | Not Available | Positive | 3376338 - 3376880 | 18795.9 |
| duf1439 domain-containing protein | EYR26_RS16035 | Not Available | Positive | 3376936 - 3377532 | 20987.3 |
| dipeptidase | EYR26_RS16040 | O06006 | Negative | 3377650 - 3378003 | 12488.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 3378069 - 3378145 | Not Available |
| dipeptidase | EYR26_RS16050 | Not Available | Negative | 3378155 - 3378358 | 7392.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

