Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction resolvase ruvx | EYR26_RS15955 | Q2P5W2 | Negative | 3364151 - 3364618 | 16657.8 |
| yqge/algh family protein | EYR26_RS15960 | Q3BR19 | Negative | 3364611 - 3365177 | 20088.7 |
| dipeptidase | EYR26_RS24880 | Not Available | Positive | 3365253 - 3366463 | 43705.2 |
| dna-3-methyladenine glycosylase i | EYR26_RS15970 | Q7VG78 | Positive | 3366460 - 3367032 | 21487.7 |
| duf72 domain-containing protein | EYR26_RS15975 | Not Available | Positive | 3367069 - 3367902 | 31370.0 |
| is5 family transposase | EYR26_RS15980 | Not Available | Negative | 3367974 - 3368772 | 30440.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 3368876 - 3368951 | Not Available |
| yitt family protein | EYR26_RS15990 | Not Available | Negative | 3368981 - 3369655 | 24097.9 |
| pilt/pilu family type 4a pilus atpase | EYR26_RS15995 | G3XCX3 | Negative | 3369927 - 3371057 | 41972.8 |
| type iv pilus twitching motility protein pilt | EYR26_RS16000 | P24559 | Negative | 3371171 - 3372208 | 38645.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

