Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | EYR26_RS15905 | Q2P5V2 | Negative | 3353502 - 3354908 | 49536.1 |
| udp-n-acetyl-alpha-d-muramoyl-l-alanyl-l- glutamate epimerase | EYR26_RS15910 | P0DQD8 | Negative | 3354889 - 3356244 | 49157.8 |
| hypothetical protein | EYR26_RS15915 | Not Available | Negative | 3356241 - 3356699 | 16302.5 |
| bifunctional aspartate kinase/diaminopimelate decarboxylase | EYR26_RS15920 | O27390 | Negative | 3356683 - 3359292 | 93964.0 |
| dipeptidase | EYR26_RS15925 | Q9CKV2 | Positive | 3359475 - 3360350 | 30918.8 |
| phzf family phenazine biosynthesis protein | EYR26_RS15930 | Q8NIL3 | Positive | 3360385 - 3361266 | 31395.1 |
| glycine zipper 2tm domain-containing protein | EYR26_RS15935 | Not Available | Negative | 3361552 - 3362151 | 21712.1 |
| osmc family protein | EYR26_RS15940 | P0C0L2 | Negative | 3362304 - 3362738 | 15285.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 3363054 - 3363130 | Not Available |
| aspartate carbamoyltransferase catalytic subunit | EYR26_RS15950 | Q3BR21 | Negative | 3363190 - 3364137 | 33623.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

