Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system effector avirulence protein avrbs3 | EYR26_RS15640 | Not Available | Positive | 3303121 - 3306513 | 118580.0 |
| dipeptidase | EYR26_RS15645 | Not Available | Positive | 3306666 - 3307709 | 37524.1 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | EYR26_RS15650 | Q2P5R0 | Negative | 3307850 - 3308599 | 27987.2 |
| deoxyribonuclease v | EYR26_RS15655 | B2SRM7 | Positive | 3308703 - 3309416 | 25640.3 |
| hypothetical protein | EYR26_RS15660 | Not Available | Positive | 3309684 - 3310340 | 23512.3 |
| pirin family protein | EYR26_RS15665 | P58114 | Positive | 3310518 - 3311408 | 32308.5 |
| hypothetical protein | EYR26_RS15670 | Not Available | Positive | 3311655 - 3312116 | 16710.3 |
| duf2235 domain-containing protein | EYR26_RS15680 | Not Available | Negative | 3312462 - 3314870 | 88891.7 |
| duf3304 domain-containing protein | EYR26_RS15685 | Not Available | Negative | 3314867 - 3315454 | 21700.5 |
| hypothetical protein | EYR26_RS23695 | Not Available | Negative | 3315508 - 3315660 | 6017.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

