Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | EYR26_RS15295 | Not Available | Negative | 3225005 - 3225803 | 30411.8 |
| duf4349 domain-containing protein | EYR26_RS15300 | Not Available | Negative | 3225846 - 3226655 | 28815.6 |
| gfa family protein | EYR26_RS15305 | Not Available | Negative | 3226652 - 3227008 | 12718.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 3227032 - 3227108 | Not Available |
| duf885 domain-containing protein | EYR26_RS15315 | Not Available | Positive | 3227241 - 3229046 | 66952.8 |
| abc transporter atp-binding protein | EYR26_RS15320 | Q57180 | Negative | 3229367 - 3231199 | 67445.2 |
| plasmid pria4b orf-3 family protein | EYR26_RS15325 | Not Available | Negative | 3231367 - 3231963 | 21563.8 |
| efflux rnd transporter permease subunit | EYR26_RS15330 | B5XPB9 | Negative | 3232029 - 3235085 | 109000.0 |
| efflux rnd transporter periplasmic adaptor subunit | EYR26_RS15335 | Not Available | Negative | 3235082 - 3236185 | 38457.3 |
| mipa/ompv family protein | EYR26_RS15340 | Not Available | Negative | 3236211 - 3237047 | 29789.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

