Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf998 domain-containing protein | EYR26_RS15245 | Not Available | Negative | 3218037 - 3218648 | 20872.2 |
| thioredoxin | EYR26_RS15250 | P77395 | Positive | 3218852 - 3219709 | 31158.1 |
| dipeptidase | EYR26_RS15255 | Not Available | Positive | 3219966 - 3220415 | 17268.8 |
| type iii secretion system effector xopab | EYR26_RS24750 | Not Available | Positive | 3221008 - 3221589 | 20506.8 |
| dipeptidase | EYR26_RS24410 | Not Available | Negative | 3221674 - 3221854 | 6290.55 |
| duf378 domain-containing protein | EYR26_RS15265 | Not Available | Positive | 3222072 - 3222296 | 7997.93 |
| peptidylprolyl isomerase | EYR26_RS15270 | Not Available | Positive | 3222344 - 3223330 | 35712.6 |
| dipeptidase | EYR26_RS24415 | Not Available | Negative | 3223380 - 3223998 | 20651.3 |
| duf2867 domain-containing protein | EYR26_RS15285 | Not Available | Positive | 3224032 - 3224427 | 14608.8 |
| hypothetical protein | EYR26_RS15290 | Not Available | Positive | 3224506 - 3224799 | 10586.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

