Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EYR26_RS15195 | Q2P0N7 | Negative | 3208208 - 3208678 | 17322.0 |
| dipeptidase | EYR26_RS15200 | Not Available | Positive | 3208806 - 3209261 | 16109.2 |
| alkaline phosphatase phox | EYR26_RS24405 | Not Available | Positive | 3209239 - 3209460 | 7990.41 |
| j domain-containing protein | EYR26_RS15205 | Not Available | Negative | 3209774 - 3210889 | 42526.6 |
| ribosome silencing factor | EYR26_RS15210 | Q02SH2 | Negative | 3210901 - 3211317 | 15218.2 |
| nicotinate-nucleotide adenylyltransferase | EYR26_RS15215 | B2FPR4 | Negative | 3211374 - 3212273 | 31203.7 |
| dna polymerase iii subunit delta | EYR26_RS15220 | Not Available | Negative | 3212270 - 3213298 | 37375.0 |
| lps assembly lipoprotein lpte | EYR26_RS15225 | Not Available | Negative | 3213321 - 3213956 | 22405.8 |
| leucine--trna ligase | EYR26_RS15235 | Q5GXI8 | Negative | 3214470 - 3217112 | 98434.7 |
| is5 family transposase | EYR26_RS15240 | Not Available | Positive | 3217230 - 3218028 | 30397.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

