Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | EYR26_RS14990 | Not Available | Positive | 3159968 - 3160604 | 24221.9 |
| type iii secretion system effector avirulence protein avrbs3 | EYR26_RS14995 | Not Available | Negative | 3160973 - 3164569 | 125820.0 |
| phage late control d family protein | EYR26_RS15000 | Not Available | Negative | 3164626 - 3165144 | 19222.2 |
| is5 family transposase | EYR26_RS15005 | Not Available | Negative | 3165455 - 3166831 | 52159.6 |
| hypothetical protein | EYR26_RS23670 | Not Available | Negative | 3167068 - 3167448 | 13977.9 |
| dipeptidase | EYR26_RS15010 | P24577 | Positive | 3167371 - 3167580 | 8197.61 |
| type iii secretion system effector avirulence protein avrbs3 | EYR26_RS15015 | Not Available | Negative | 3167616 - 3170804 | 111748.0 |
| dipeptidase | EYR26_RS15020 | Not Available | Negative | 3170935 - 3171411 | 17810.2 |
| is5 family transposase | EYR26_RS15025 | Not Available | Positive | 3171534 - 3172898 | 51605.9 |
| dipeptidase | EYR26_RS15030 | Not Available | Negative | 3172916 - 3173544 | 22679.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

