Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal kinase | EYR26_RS14610 | Q1LFU5 | Negative | 3085481 - 3086389 | 31920.4 |
| molecular chaperone dnaj | EYR26_RS14620 | Q2P458 | Negative | 3086917 - 3088047 | 40450.7 |
| molecular chaperone dnak | EYR26_RS14625 | Q2P459 | Negative | 3088200 - 3090125 | 68759.0 |
| nucleotide exchange factor grpe | EYR26_RS14630 | Q2P460 | Negative | 3090267 - 3090785 | 18927.4 |
| heat-inducible transcriptional repressor hrca | EYR26_RS14635 | Q5H188 | Negative | 3090886 - 3091917 | 37540.4 |
| dna repair protein recn | EYR26_RS14640 | Q9PB02 | Positive | 3092055 - 3093719 | 59540.4 |
| ferric iron uptake transcriptional regulator | EYR26_RS14645 | Q03456 | Negative | 3094159 - 3094569 | 15775.8 |
| outer membrane protein assembly factor bame | EYR26_RS14650 | Q8PAL4 | Positive | 3094674 - 3095069 | 14892.7 |
| rnfh family protein | EYR26_RS14660 | Q9PAZ9 | Negative | 3095417 - 3095692 | 9823.92 |
| type ii toxin-antitoxin system rata family toxin | EYR26_RS14665 | O68560 | Negative | 3095706 - 3096137 | 16230.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

