Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | EYR26_RS14100 | Q4UTA5 | Negative | 2987472 - 2987921 | 15598.5 |
| 30s ribosomal protein s18 | EYR26_RS14105 | Q4UTA4 | Negative | 2988182 - 2988412 | 8975.88 |
| 30s ribosomal protein s6 | EYR26_RS14110 | Q2P328 | Negative | 2988424 - 2988855 | 16384.2 |
| iron-sulfur cluster assembly accessory protein | EYR26_RS14115 | O67709 | Negative | 2989209 - 2989547 | 11992.0 |
| asparagine--trna ligase | EYR26_RS14125 | Q5H049 | Positive | 2989752 - 2991146 | 51882.7 |
| hypothetical protein | EYR26_RS14130 | Not Available | Positive | 2991148 - 2991405 | 8986.17 |
| hypothetical protein | EYR26_RS14135 | Not Available | Positive | 2991402 - 2991707 | 11095.0 |
| hypothetical protein | EYR26_RS14140 | Not Available | Positive | 2991704 - 2992030 | 11855.7 |
| fmn-binding negative transcriptional regulator | EYR26_RS14145 | Not Available | Positive | 2992032 - 2992670 | 23264.4 |
| carbonate dehydratase | EYR26_RS14150 | P61517 | Positive | 2992759 - 2993421 | 25119.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

