Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-formylglutamate deformylase | EYR26_RS14005 | Q9HU92 | Positive | 2960374 - 2961231 | 31899.6 |
| urocanate hydratase | EYR26_RS14010 | Q3BV06 | Positive | 2961248 - 2962915 | 59975.6 |
| acyltransferase | EYR26_RS14015 | Not Available | Positive | 2963275 - 2964369 | 39708.4 |
| hypothetical protein | EYR26_RS14020 | Not Available | Positive | 2964499 - 2965227 | 26483.3 |
| dipeptidase | EYR26_RS14025 | P80011 | Negative | 2965313 - 2965477 | 6004.39 |
| type iii secretion system effector avirulence protein avrbs3 | EYR26_RS14030 | Not Available | Positive | 2965585 - 2968977 | 118881.0 |
| dipeptidase | EYR26_RS14035 | Not Available | Positive | 2968999 - 2969469 | 17805.3 |
| dipeptidase | EYR26_RS14040 | Not Available | Negative | 2969500 - 2970330 | 31964.4 |
| dipeptidase | EYR26_RS14045 | Not Available | Negative | 2970353 - 2971325 | 35346.1 |
| transposase | EYR26_RS14050 | Not Available | Negative | 2971481 - 2972455 | 36751.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

