Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | EYR26_RS13845 | Not Available | Positive | 2927529 - 2928065 | 21030.3 |
| type iii secretion system effector avirulence protein avrbs3 | EYR26_RS13855 | Not Available | Negative | 2928164 - 2931556 | 118836.0 |
| contractile injection system protein, vgrg/pvc8 family | EYR26_RS13860 | Not Available | Negative | 2931613 - 2931999 | 14301.1 |
| dipeptidase | EYR26_RS13865 | Not Available | Negative | 2931982 - 2932236 | 9599.5 |
| dipeptidase | EYR26_RS13870 | Not Available | Positive | 2932478 - 2933854 | 52146.6 |
| hypothetical protein | EYR26_RS13875 | Not Available | Negative | 2933996 - 2934196 | 7126.62 |
| dipeptidase | EYR26_RS13880 | Not Available | Positive | 2934298 - 2934507 | 8229.71 |
| type iii secretion system effector avirulence protein avrbs3 | EYR26_RS13885 | P14727 | Negative | 2934544 - 2938038 | 122286.0 |
| dipeptidase | EYR26_RS13890 | Not Available | Positive | 2938136 - 2938924 | 29934.1 |
| Trna-ser | Not Available | Not Available | Positive | 2939183 - 2939272 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

