Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome assembly rna-binding protein yhby | EYR26_RS13480 | P71376 | Positive | 2857576 - 2857881 | 11180.7 |
| mth938-like domain-containing protein | EYR26_RS13485 | Not Available | Positive | 2857897 - 2858271 | 13392.3 |
| peptidoglycan dd-metalloendopeptidase family protein | EYR26_RS13490 | P45682 | Negative | 2858464 - 2859237 | 26584.7 |
| yqaa family protein | EYR26_RS13495 | P44832 | Negative | 2859234 - 2859848 | 22273.9 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | EYR26_RS13500 | Q2P1L5 | Negative | 2859867 - 2860544 | 24235.3 |
| 5'/3'-nucleotidase sure | EYR26_RS13505 | Q2P1L4 | Negative | 2860541 - 2861320 | 27392.4 |
| smr/muts family protein | EYR26_RS13510 | A8GH84 | Positive | 2861420 - 2861959 | 19683.5 |
| trna pseudouridine(13) synthase trud | EYR26_RS13515 | Q2P1L2 | Negative | 2862248 - 2863357 | 40334.6 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | EYR26_RS13520 | Q2P1L1 | Negative | 2863478 - 2863969 | 17283.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2863992 - 2864065 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

