Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mase1 domain-containing protein | EYR26_RS13215 | Not Available | Negative | 2809069 - 2810619 | 58963.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2810975 - 2811053 | Not Available |
| sugar porter family mfs transporter | EYR26_RS13225 | P15729 | Negative | 2811165 - 2812592 | 50223.9 |
| xylose isomerase | EYR26_RS13230 | Q5GYQ7 | Negative | 2812678 - 2814015 | 48735.0 |
| xylulokinase | EYR26_RS13235 | P44401 | Negative | 2814064 - 2815557 | 52933.0 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | EYR26_RS13240 | Q8L7W8 | Negative | 2815554 - 2817857 | 84355.7 |
| dipeptidase | EYR26_RS13245 | A7LXT0 | Negative | 2817949 - 2820850 | 104871.0 |
| dipeptidase | EYR26_RS13250 | Not Available | Positive | 2821115 - 2821452 | 12216.8 |
| lysr family transcriptional regulator | EYR26_RS13255 | P52661 | Negative | 2821650 - 2822621 | 35294.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | EYR26_RS13260 | Q6BF16 | Positive | 2823029 - 2823661 | 22029.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

