Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:other | Not Available | Not Available | Positive | 2786425 - 2786501 | Not Available |
| bifunctional diguanylate cyclase/phosphodiesterase | EYR26_RS13110 | Not Available | Positive | 2786816 - 2788672 | 68080.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2788734 - 2788809 | Not Available |
| sodium/sugar symporter | EYR26_RS13120 | P96169 | Negative | 2788913 - 2790475 | 56229.4 |
| exo 1,3/1,4-beta-d-glucan glucohydrolase | EYR26_RS13130 | A7LXU3 | Negative | 2790733 - 2793345 | 91720.3 |
| phox family phosphatase | EYR26_RS13135 | Not Available | Positive | 2793775 - 2795730 | 69464.9 |
| aaa family atpase | EYR26_RS13145 | Not Available | Negative | 2795964 - 2796587 | 22397.7 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | EYR26_RS13150 | Not Available | Negative | 2796591 - 2796935 | 12071.5 |
| glucose-6-phosphate isomerase | EYR26_RS13155 | Q5H0A7 | Negative | 2797094 - 2798608 | 54271.5 |
| aspartate 1-decarboxylase | EYR26_RS13160 | Q8PLK9 | Negative | 2798605 - 2798985 | 13624.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

