Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate dehydrogenase | EYR26_RS13040 | B2SLC0 | Positive | 2776788 - 2777840 | 37609.1 |
| dmt family transporter | EYR26_RS13045 | A6WUW2 | Positive | 2777834 - 2778745 | 33222.5 |
| dipeptidase | EYR26_RS13055 | Not Available | Positive | 2778884 - 2779058 | 6483.9 |
| mfs transporter | EYR26_RS13065 | Q6GJ96 | Positive | 2779352 - 2780635 | 45677.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2780639 - 2780714 | Not Available |
| phosphatase pap2 family protein | EYR26_RS13075 | O34349 | Negative | 2780776 - 2781507 | 26559.5 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | EYR26_RS13080 | Q2P3M7 | Negative | 2781488 - 2782753 | 45003.1 |
| atp-binding protein | EYR26_RS13085 | Not Available | Positive | 2782874 - 2784100 | 44024.6 |
| response regulator transcription factor | EYR26_RS13090 | A6UEL7 | Positive | 2784097 - 2784663 | 20611.9 |
| cellulase family glycosylhydrolase | EYR26_RS13100 | B3PF24 | Negative | 2785182 - 2786168 | 35314.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

