Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | EYR26_RS12935 | Q2P3K1 | Negative | 2754026 - 2755153 | 42030.8 |
| histidinol-phosphate transaminase | EYR26_RS12940 | Q2P3K2 | Negative | 2755150 - 2756241 | 38518.2 |
| histidinol dehydrogenase | EYR26_RS12945 | Q2P3K3 | Negative | 2756238 - 2757533 | 44692.6 |
| atp phosphoribosyltransferase | EYR26_RS12950 | Q2P3K4 | Negative | 2757530 - 2758444 | 32779.7 |
| yerc/yecd family trpr-related protein | EYR26_RS12955 | Not Available | Negative | 2758454 - 2758780 | 11707.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2759056 - 2759132 | Not Available |
| histidine--trna ligase | EYR26_RS12965 | B2SKP3 | Negative | 2759538 - 2760950 | 51904.4 |
| dipeptidase | EYR26_RS12975 | Not Available | Positive | 2761147 - 2761817 | 23615.9 |
| murein l,d-transpeptidase catalytic domain family protein | EYR26_RS12980 | Not Available | Negative | 2762217 - 2762960 | 26414.4 |
| threonine synthase | EYR26_RS12985 | P00934 | Negative | 2763063 - 2764367 | 45294.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

