Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa lyase | EYR26_RS12830 | P35915 | Positive | 2733275 - 2734171 | 31002.1 |
| sdr family nad(p)-dependent oxidoreductase | EYR26_RS12835 | P9WGQ6 | Positive | 2734310 - 2735080 | 26166.7 |
| elongation factor p-like protein yeip | EYR26_RS12840 | Q3BUD7 | Positive | 2735216 - 2735782 | 20599.3 |
| hypothetical protein | EYR26_RS12845 | Not Available | Positive | 2735782 - 2736168 | 14225.8 |
| duf4105 domain-containing protein | EYR26_RS12855 | Not Available | Negative | 2736728 - 2738587 | 68435.0 |
| duf2388 domain-containing protein | EYR26_RS12860 | Not Available | Negative | 2738584 - 2738883 | 9907.69 |
| fad-binding oxidoreductase | EYR26_RS12865 | P0DV35 | Negative | 2738918 - 2740336 | 50859.8 |
| phosphoglycerate dehydrogenase | EYR26_RS12870 | P43885 | Positive | 2740545 - 2741786 | 43911.7 |
| nudix hydrolase | EYR26_RS12875 | Not Available | Negative | 2741935 - 2742522 | 21893.7 |
| amino acid permease | EYR26_RS12880 | Q797A7 | Positive | 2742665 - 2744137 | 51791.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

