Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t6ss effector bth_i2691 family protein | EYR26_RS12400 | Not Available | Positive | 2626285 - 2628633 | 85365.9 |
| putative type vi secretion system effector | EYR26_RS24365 | Not Available | Positive | 2628651 - 2629388 | 26819.5 |
| dipeptidase | EYR26_RS12410 | Not Available | Positive | 2629415 - 2630143 | 26689.4 |
| is5 family transposase | EYR26_RS12415 | Not Available | Negative | 2630167 - 2631543 | 52239.7 |
| dipeptidase | EYR26_RS12420 | P24537 | Negative | 2631660 - 2632404 | 27843.8 |
| type iii secretion system effector xopav | EYR26_RS12425 | Not Available | Positive | 2632726 - 2633391 | 23793.2 |
| is4 family transposase | EYR26_RS12430 | Not Available | Negative | 2633439 - 2634653 | 45662.8 |
| dipeptidase | EYR26_RS24370 | Not Available | Negative | 2634788 - 2635060 | 9321.2 |
| syme family type i addiction module toxin | EYR26_RS12440 | Not Available | Negative | 2635147 - 2635563 | 15450.7 |
| hypothetical protein | EYR26_RS12445 | Not Available | Negative | 2635560 - 2635832 | 9465.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

