Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EYR26_RS12345 | Q2SU77 | Negative | 2614273 - 2615370 | 39595.3 |
| glucose-6-phosphate dehydrogenase | EYR26_RS12350 | O68282 | Positive | 2615793 - 2617223 | 52837.0 |
| glucokinase | EYR26_RS12355 | Q2P3D0 | Positive | 2617220 - 2618227 | 35533.6 |
| 6-phosphogluconolactonase | EYR26_RS12360 | Q9PEG5 | Positive | 2618224 - 2618943 | 25991.2 |
| phosphogluconate dehydratase | EYR26_RS12365 | Q9Z3S0 | Positive | 2619046 - 2620962 | 67394.4 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | EYR26_RS12370 | P0A957 | Positive | 2621017 - 2621676 | 22818.1 |
| dipeptidase | EYR26_RS12380 | Not Available | Positive | 2621893 - 2622425 | 19704.6 |
| hypothetical protein | EYR26_RS12385 | Not Available | Positive | 2622523 - 2622666 | 5195.98 |
| t6ss effector bth_i2691 family protein | EYR26_RS12390 | Not Available | Positive | 2622663 - 2625497 | 103243.0 |
| putative type vi secretion system effector | EYR26_RS12395 | Not Available | Positive | 2625523 - 2626260 | 26904.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

