Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | EYR26_RS12145 | Not Available | Positive | 2576338 - 2576547 | 7546.91 |
| dipeptidase | EYR26_RS12150 | Not Available | Negative | 2576579 - 2577670 | 42509.6 |
| type iii secretion system effector avirulence protein avrbs3 | EYR26_RS12155 | Not Available | Negative | 2577745 - 2581137 | 118809.0 |
| contractile injection system protein, vgrg/pvc8 family | EYR26_RS12160 | Not Available | Negative | 2581194 - 2581460 | 10028.0 |
| is3 family transposase | EYR26_RS12165 | Not Available | Positive | 2581762 - 2582873 | 42711.1 |
| mfs transporter | EYR26_RS12175 | Not Available | Positive | 2583066 - 2584307 | 43336.0 |
| m20/m25/m40 family metallo-hydrolase | EYR26_RS12180 | Not Available | Negative | 2584454 - 2586031 | 57871.3 |
| taud/tfda family dioxygenase | EYR26_RS12185 | P10088 | Negative | 2586147 - 2586989 | 30888.6 |
| is5 family transposase | EYR26_RS12190 | Not Available | Positive | 2587008 - 2587806 | 30411.8 |
| gnat family n-acetyltransferase | EYR26_RS12195 | Not Available | Negative | 2587886 - 2588422 | 19664.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

