Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYR26_RS11980 | Not Available | Negative | 2528529 - 2529140 | 22109.4 |
| duf6708 domain-containing protein | EYR26_RS11985 | Not Available | Negative | 2529218 - 2530117 | 34017.9 |
| t6ss effector bth_i2691 family protein | EYR26_RS24350 | Not Available | Negative | 2530124 - 2532538 | 86530.5 |
| duf6708 domain-containing protein | EYR26_RS11995 | Not Available | Negative | 2532587 - 2533486 | 33990.8 |
| t6ss effector bth_i2691 family protein | EYR26_RS24355 | Not Available | Negative | 2533494 - 2536787 | 117780.0 |
| duf4123 domain-containing protein | EYR26_RS12005 | Not Available | Negative | 2536780 - 2537727 | 35276.0 |
| type vi secretion system vgr family protein | EYR26_RS12010 | Not Available | Negative | 2537740 - 2540493 | 95830.6 |
| dipeptidase | EYR26_RS12015 | Not Available | Positive | 2540582 - 2540845 | 10116.4 |
| hypothetical protein | EYR26_RS12020 | Not Available | Negative | 2540870 - 2541658 | 29153.8 |
| is3 family transposase | EYR26_RS12025 | P0CF79 | Negative | 2541951 - 2542619 | 25617.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

