Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | EYR26_RS11925 | Q9I745 | Negative | 2520808 - 2521311 | 18711.4 |
| type vi secretion system accessory protein tagj | EYR26_RS11930 | Q9I746 | Negative | 2521299 - 2522132 | 30669.5 |
| type vi secretion system tube protein hcp | EYR26_RS11935 | Q9I747 | Negative | 2522168 - 2522671 | 17843.7 |
| type vi secretion system contractile sheath large subunit | EYR26_RS11940 | Not Available | Negative | 2522771 - 2524285 | 56103.1 |
| type vi secretion system contractile sheath small subunit | EYR26_RS11945 | Not Available | Negative | 2524278 - 2524784 | 18204.8 |
| dipeptidase | EYR26_RS11955 | Not Available | Negative | 2525278 - 2525421 | 5533.39 |
| dipeptidase | EYR26_RS11960 | Not Available | Negative | 2525417 - 2525785 | 13641.0 |
| duf6708 domain-containing protein | EYR26_RS11965 | Not Available | Negative | 2526034 - 2526930 | 33769.7 |
| hypothetical protein | EYR26_RS11970 | Not Available | Negative | 2526938 - 2527549 | 22046.5 |
| duf6708 domain-containing protein | EYR26_RS11975 | Not Available | Negative | 2527627 - 2528523 | 33907.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

