Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | EYR26_RS11875 | Q9I753 | Negative | 2507715 - 2509052 | 48521.7 |
| type vi secretion system-associated fha domain protein tagh | EYR26_RS11880 | Not Available | Negative | 2509049 - 2510458 | 48947.6 |
| duf6931 family protein | EYR26_RS11885 | Not Available | Negative | 2510455 - 2510994 | 19019.6 |
| type vi secretion system vgr family protein | EYR26_RS11890 | Q9I737 | Negative | 2511003 - 2512940 | 70627.8 |
| hypothetical protein | EYR26_RS11895 | Not Available | Negative | 2513204 - 2513665 | 16738.8 |
| hypothetical protein | EYR26_RS24345 | Not Available | Negative | 2513766 - 2514212 | 15699.7 |
| hypothetical protein | EYR26_RS11905 | Not Available | Negative | 2514321 - 2515151 | 30771.6 |
| type vi secretion system atpase tssh | EYR26_RS11910 | Q9I742 | Negative | 2515215 - 2517920 | 98089.9 |
| type vi secretion system baseplate subunit tssg | EYR26_RS11915 | Not Available | Negative | 2517953 - 2518963 | 37265.7 |
| type vi secretion system baseplate subunit tssf | EYR26_RS11920 | Not Available | Negative | 2518927 - 2520804 | 69352.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

