Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system vira-like sensor kinase | EYR26_RS11825 | P10799 | Positive | 2493589 - 2496048 | 88836.6 |
| lysr family transcriptional regulator | EYR26_RS11830 | P04682 | Positive | 2496162 - 2497142 | 35045.6 |
| type vi secretion system protein tssa | EYR26_RS11835 | Q9I750 | Positive | 2497151 - 2498179 | 37543.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2498240 - 2498315 | Not Available |
| hypothetical protein | EYR26_RS11845 | Not Available | Negative | 2498352 - 2498678 | 12207.9 |
| bifunctional serine/threonine-protein kinase/formylglycine-generating enzyme family protein | EYR26_RS11850 | Q8KY50 | Negative | 2498675 - 2501575 | 105216.0 |
| pp2c family serine/threonine-protein phosphatase | EYR26_RS11855 | Not Available | Negative | 2501572 - 2502294 | 25878.8 |
| type vi secretion system-associated protein tagf | EYR26_RS11860 | Not Available | Negative | 2502291 - 2502938 | 22417.9 |
| type vi secretion system membrane subunit tssm | EYR26_RS11865 | Q9I755 | Negative | 2502935 - 2506393 | 123787.0 |
| type ivb secretion system protein icmh/dotu | EYR26_RS11870 | Not Available | Negative | 2506397 - 2507713 | 47219.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

