Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | EYR26_RS00625 | Q54M29 | Negative | 136262 - 137113 | 30347.0 |
| ferrochelatase | EYR26_RS00630 | Q8PEX0 | Negative | 137116 - 138081 | 35549.5 |
| ysc84-related protein | EYR26_RS00635 | P32793 | Positive | 138235 - 139140 | 31599.6 |
| sec-independent protein translocase subunit tata | EYR26_RS00640 | Q8PEX2 | Positive | 139213 - 139440 | 8283.89 |
| sec-independent protein translocase protein tatb | EYR26_RS00645 | Q8PEX3 | Positive | 139456 - 140082 | 21852.9 |
| twin-arginine translocase subunit tatc | EYR26_RS00650 | P44560 | Positive | 140079 - 140834 | 27196.0 |
| bpss1780 family membrane protein | EYR26_RS00655 | Not Available | Negative | 140986 - 141885 | 31598.0 |
| glutamine amidotransferase | EYR26_RS00660 | Q9Y933 | Negative | 141945 - 142697 | 27476.8 |
| type iii secretion system effector xopad | EYR26_RS00670 | Not Available | Positive | 143322 - 151979 | 312404.0 |
| gspe/pule family protein | EYR26_RS00675 | Q6FA79 | Negative | 152373 - 154187 | 66691.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

