Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | EYR26_RS11735 | Not Available | Negative | 2469882 - 2470984 | 42376.5 |
| dipeptidase | EYR26_RS11740 | Not Available | Positive | 2471053 - 2471442 | 14509.6 |
| 2-oxoglutarate and iron-dependent oxygenase domain-containing protein | EYR26_RS11745 | P32021 | Positive | 2471579 - 2472733 | 43176.2 |
| polymorphic toxin-type hint domain-containing protein | EYR26_RS11750 | Not Available | Negative | 2472768 - 2473172 | 15052.5 |
| hypothetical protein | EYR26_RS11755 | Not Available | Negative | 2473247 - 2473699 | 17021.4 |
| right-handed parallel beta-helix repeat-containing protein | EYR26_RS11760 | Not Available | Positive | 2474508 - 2475830 | 46566.2 |
| dipeptidase | EYR26_RS11765 | Not Available | Positive | 2476249 - 2476380 | 4872.91 |
| multidrug efflux rnd transporter permease subunit | EYR26_RS11770 | P24181 | Negative | 2476524 - 2479649 | 110916.0 |
| efflux rnd transporter periplasmic adaptor subunit | EYR26_RS11775 | P0AE07 | Negative | 2479701 - 2480813 | 39519.4 |
| tetr/acrr family transcriptional regulator | EYR26_RS11780 | P32265 | Positive | 2480938 - 2481516 | 21143.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

