Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cinnamoyl-coa reductase | EYR26_RS11410 | Not Available | Negative | 2389803 - 2390423 | 23096.8 |
| dipeptidase | EYR26_RS24870 | Not Available | Negative | 2390560 - 2390844 | 10282.5 |
| gnat family n-acetyltransferase | EYR26_RS11415 | Not Available | Negative | 2391107 - 2392228 | 42678.3 |
| thioredoxin-disulfide reductase | EYR26_RS11420 | Q9KSS4 | Negative | 2392286 - 2393254 | 34327.6 |
| dna translocase ftsk | EYR26_RS11425 | Q8PL00 | Positive | 2393538 - 2395895 | 84867.9 |
| dipeptidase | EYR26_RS11430 | Not Available | Positive | 2396058 - 2397991 | 69836.7 |
| outer membrane lipoprotein chaperone lola | EYR26_RS11435 | Q2P2R9 | Positive | 2398056 - 2398727 | 24759.3 |
| xopz family type iii secretion system effector | EYR26_RS11440 | Not Available | Negative | 2398840 - 2403006 | 151191.0 |
| replication-associated recombination protein a | EYR26_RS11450 | P39918 | Positive | 2403243 - 2404619 | 50529.3 |
| duf190 domain-containing protein | EYR26_RS11455 | Not Available | Negative | 2404651 - 2404977 | 11490.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

