Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | EYR26_RS00575 | Q9HAT2 | Negative | 124599 - 126563 | 70676.3 |
| alpha-glucuronidase family glycosyl hydrolase | EYR26_RS00580 | B3PC73 | Negative | 126560 - 128755 | 80522.3 |
| hypothetical protein | EYR26_RS24130 | Not Available | Negative | 128873 - 129037 | 6093.54 |
| laci family dna-binding transcriptional regulator | EYR26_RS00585 | P37947 | Positive | 128988 - 129998 | 35860.3 |
| xylose isomerase | EYR26_RS00590 | Not Available | Negative | 130225 - 131562 | 48865.0 |
| trna 2-thiocytidine(32) synthetase ttca | EYR26_RS00600 | B2SIG7 | Positive | 132166 - 133083 | 33643.7 |
| recombination-associated protein rdgc | EYR26_RS00605 | Q8PEW7 | Positive | 133147 - 134052 | 33430.3 |
| sprt family zinc-dependent metalloprotease | EYR26_RS00610 | Not Available | Positive | 134667 - 135452 | 29893.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 135515 - 135590 | Not Available |
| hypothetical protein | EYR26_RS00620 | Not Available | Negative | 135723 - 136181 | 16635.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

