Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| degt/dnrj/eryc1/strs aminotransferase family protein | EYR26_RS11215 | Q6U1I3 | Negative | 2347601 - 2348710 | 40535.9 |
| sigma-54 dependent transcriptional regulator | EYR26_RS11220 | G3XCV0 | Negative | 2348829 - 2350313 | 54325.1 |
| response regulator transcription factor | EYR26_RS11225 | Q0A9Z5 | Negative | 2350310 - 2350690 | 14099.0 |
| rna polymerase factor sigma-54 | EYR26_RS11230 | A0A0H2ZGR9 | Negative | 2350699 - 2352102 | 51240.1 |
| response regulator transcription factor | EYR26_RS11235 | P9WGM4 | Negative | 2352325 - 2352912 | 21082.9 |
| hypothetical protein | EYR26_RS24330 | Not Available | Positive | 2352847 - 2352984 | 4841.48 |
| pilz domain-containing protein | EYR26_RS11240 | Not Available | Negative | 2353028 - 2353594 | 20465.4 |
| hypothetical protein | EYR26_RS11245 | Not Available | Negative | 2353594 - 2353887 | 11421.9 |
| flagellar export chaperone flis | EYR26_RS11250 | Q9I4N6 | Negative | 2353896 - 2354309 | 14616.2 |
| flagellar filament capping protein flid | EYR26_RS11255 | Q9KQ63 | Negative | 2354460 - 2355785 | 44582.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

