Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar export protein flij | EYR26_RS11100 | Not Available | Negative | 2325370 - 2325825 | 17508.6 |
| flii/yscn family atpase | EYR26_RS11105 | Q9I4N1 | Negative | 2325829 - 2327205 | 48747.7 |
| flih/sctl family protein | EYR26_RS11110 | Not Available | Negative | 2327202 - 2327822 | 22082.2 |
| flagellar motor switch protein flig | EYR26_RS11115 | Q51464 | Negative | 2327819 - 2328808 | 35289.8 |
| flagellar basal-body ms-ring/collar protein flif | EYR26_RS11120 | Q51463 | Negative | 2328819 - 2330543 | 61726.3 |
| flagellar hook-basal body complex protein flie | EYR26_RS11125 | A1U260 | Negative | 2330557 - 2330928 | 12958.4 |
| glycosyltransferase | EYR26_RS11135 | Q50864 | Negative | 2331826 - 2335326 | 127323.0 |
| dipeptidase | EYR26_RS11140 | Not Available | Positive | 2335559 - 2336353 | 29688.6 |
| is5-like element isxo1 family transposase | EYR26_RS11145 | Not Available | Positive | 2336545 - 2337513 | 36296.8 |
| hypothetical protein | EYR26_RS11150 | Not Available | Positive | 2337716 - 2338660 | 32637.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

