Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 2289737 - 2289812 | Not Available |
| cytochrome c | EYR26_RS10960 | P82903 | Negative | 2289905 - 2290366 | 15628.2 |
| c-type cytochrome | EYR26_RS10965 | Not Available | Negative | 2290375 - 2290767 | 13523.1 |
| efflux rnd transporter periplasmic adaptor subunit | EYR26_RS10970 | Q8G2M7 | Positive | 2290971 - 2292104 | 39795.8 |
| efflux rnd transporter permease subunit | EYR26_RS10975 | P25197 | Positive | 2292101 - 2295613 | 124934.0 |
| efflux rnd transporter permease subunit | EYR26_RS10980 | D0ZEW1 | Positive | 2295610 - 2298696 | 112564.0 |
| dipeptidase | EYR26_RS10985 | Not Available | Negative | 2298827 - 2299429 | 22408.4 |
| hypothetical protein | EYR26_RS24720 | Not Available | Negative | 2299449 - 2299571 | 4541.41 |
| dipeptidase | EYR26_RS10990 | P37248 | Negative | 2299643 - 2300179 | 20561.8 |
| hypothetical protein | EYR26_RS23625 | Not Available | Negative | 2300231 - 2300404 | 6554.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

