Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-nitrogen hydrolase | EYR26_RS10655 | Q9XGI9 | Negative | 2233601 - 2234485 | 32694.8 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2234617 - 2234693 | Not Available |
| agmatine/peptidylarginine deiminase | EYR26_RS10665 | A4VFL7 | Negative | 2234756 - 2235790 | 37773.7 |
| hypothetical protein | EYR26_RS10670 | Not Available | Negative | 2236027 - 2236368 | 12475.2 |
| type b 50s ribosomal protein l36 | EYR26_RS10675 | P66309 | Negative | 2236618 - 2236743 | 4872.19 |
| (d)cmp kinase | EYR26_RS10680 | Q3BSN5 | Positive | 2236916 - 2237599 | 24112.8 |
| 30s ribosomal protein s1 | EYR26_RS10685 | P37985 | Positive | 2237783 - 2239468 | 61731.3 |
| integration host factor subunit beta | EYR26_RS10690 | Q2P3S1 | Positive | 2239557 - 2239868 | 11451.8 |
| lipopolysaccharide assembly protein lapa domain-containing protein | EYR26_RS10695 | Not Available | Positive | 2239936 - 2240241 | 10588.6 |
| lipopolysaccharide assembly protein lapb | EYR26_RS10700 | P0AB60 | Positive | 2240248 - 2241426 | 44035.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

