Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium and cobalt transport protein cora | EYR26_RS09795 | Not Available | Negative | 2065361 - 2066362 | 37944.9 |
| duf4105 domain-containing protein | EYR26_RS09800 | Not Available | Negative | 2066378 - 2067658 | 47492.9 |
| hlyc/corc family transporter | EYR26_RS09805 | Q9KTE3 | Negative | 2067655 - 2068533 | 32134.9 |
| hypothetical protein | EYR26_RS09810 | Not Available | Negative | 2068628 - 2069146 | 18438.4 |
| rrna maturation rnase ybey | EYR26_RS09815 | Q2P263 | Negative | 2069146 - 2069631 | 17517.0 |
| hypothetical protein | EYR26_RS09820 | Not Available | Negative | 2069686 - 2070348 | 23615.9 |
| phoh family protein | EYR26_RS09825 | P0A9K5 | Negative | 2070559 - 2071545 | 36044.4 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | EYR26_RS09830 | Q2P266 | Negative | 2071969 - 2073423 | 52764.9 |
| dipeptidase | EYR26_RS09835 | Not Available | Negative | 2073462 - 2074045 | 21329.5 |
| dipeptidase | EYR26_RS09840 | Not Available | Positive | 2074230 - 2075157 | 31384.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

