Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine abc transporter substrate-binding protein | EYR26_RS09745 | P31133 | Positive | 2054185 - 2055300 | 40659.5 |
| hlyd family secretion protein | EYR26_RS09750 | Not Available | Positive | 2055577 - 2056779 | 42953.8 |
| mdr family mfs transporter | EYR26_RS09755 | P0DPR7 | Positive | 2056776 - 2058362 | 55541.3 |
| efflux transporter outer membrane subunit | EYR26_RS09760 | P15727 | Positive | 2058367 - 2059860 | 53270.4 |
| abc transporter atp-binding protein | EYR26_RS09765 | P31134 | Positive | 2060006 - 2061139 | 40972.3 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2061201 - 2061276 | Not Available |
| abc transporter permease subunit | EYR26_RS09775 | P31135 | Positive | 2061268 - 2062179 | 33330.1 |
| abc transporter permease subunit | EYR26_RS09780 | P0AFL2 | Positive | 2062176 - 2063024 | 30282.2 |
| hypothetical protein | EYR26_RS09785 | Not Available | Negative | 2063180 - 2063599 | 15279.0 |
| nad-dependent succinate-semialdehyde dehydrogenase | EYR26_RS09790 | P76149 | Positive | 2063845 - 2065209 | 48675.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

