Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter permease subunit | EYR26_RS09595 | P31224 | Negative | 2010245 - 2013415 | 113496.0 |
| efflux rnd transporter periplasmic adaptor subunit | EYR26_RS09600 | Not Available | Negative | 2013428 - 2014735 | 45055.1 |
| tetr/acrr family transcriptional regulator | EYR26_RS09605 | Not Available | Negative | 2014750 - 2015409 | 24501.4 |
| nad-glutamate dehydrogenase domain-containing protein | EYR26_RS09610 | Q9HZE0 | Positive | 2015687 - 2020711 | 186404.0 |
| hypothetical protein | EYR26_RS24310 | Not Available | Negative | 2020910 - 2021482 | 21445.9 |
| dipeptidase | EYR26_RS09620 | Not Available | Negative | 2021482 - 2021616 | 5133.16 |
| methyl-accepting chemotaxis protein | EYR26_RS24865 | Not Available | Negative | 2021694 - 2021816 | 4336.2 |
| dipeptidase | EYR26_RS09630 | P31474 | Negative | 2021806 - 2023232 | 49413.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2023758 - 2023834 | Not Available |
| hd-gyp domain-containing protein | EYR26_RS09640 | Q4UU85 | Negative | 2024017 - 2025003 | 35812.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

