Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type vi secretion system effector | EYR26_RS09545 | Not Available | Negative | 1992980 - 1993717 | 26688.3 |
| t6ss effector bth_i2691 family protein | EYR26_RS09550 | Not Available | Negative | 1993738 - 1996572 | 103275.0 |
| duf4123 domain-containing protein | EYR26_RS09555 | Not Available | Negative | 1996569 - 1997495 | 33742.3 |
| type vi secretion system vgr family protein | EYR26_RS09560 | Not Available | Negative | 1997504 - 2000287 | 97280.3 |
| carbohydrate porin | EYR26_RS09565 | Not Available | Negative | 2000681 - 2001958 | 46244.3 |
| pts fructose transporter subunit iic | EYR26_RS09570 | P23355 | Negative | 2002136 - 2003878 | 58524.7 |
| 1-phosphofructokinase | EYR26_RS09575 | P23354 | Negative | 2004037 - 2004993 | 33188.8 |
| phosphoenolpyruvate--protein phosphotransferase | EYR26_RS09580 | P45597 | Negative | 2004990 - 2007506 | 88248.4 |
| laci family dna-binding transcriptional regulator | EYR26_RS09585 | Q88HH7 | Positive | 2007667 - 2008662 | 35804.2 |
| dipeptidase | EYR26_RS09590 | Not Available | Negative | 2008804 - 2010130 | 47902.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

