Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna guanosine(34) transglycosylase tgt | EYR26_RS09495 | Q2P2X0 | Positive | 1980468 - 1981613 | 42090.2 |
| preprotein translocase subunit yajc | EYR26_RS09500 | P0ADZ9 | Positive | 1981745 - 1982098 | 12348.3 |
| protein translocase subunit secd | EYR26_RS09505 | Q9HXI1 | Positive | 1982289 - 1984133 | 65758.1 |
| protein translocase subunit secf | EYR26_RS09510 | P0AG95 | Positive | 1984247 - 1985215 | 35322.5 |
| phage integrase n-terminal sam-like domain-containing protein | EYR26_RS09515 | Not Available | Negative | 1985296 - 1985604 | 11723.0 |
| is3 family transposase | EYR26_RS09520 | Not Available | Negative | 1985650 - 1986692 | 40026.6 |
| putative type vi secretion system effector | EYR26_RS09525 | Not Available | Negative | 1986882 - 1987628 | 27087.1 |
| is3 family transposase | EYR26_RS09530 | Not Available | Positive | 1987911 - 1989013 | 42328.4 |
| t6ss effector bth_i2691 family protein | EYR26_RS09535 | Not Available | Negative | 1989027 - 1991816 | 101254.0 |
| duf4123 domain-containing protein | EYR26_RS09540 | Not Available | Negative | 1991828 - 1992817 | 36584.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

