Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | EYR26_RS08680 | Not Available | Positive | 1817959 - 1818594 | 22116.8 |
| pilx n-terminal domain-containing pilus assembly protein | EYR26_RS08685 | Not Available | Positive | 1818669 - 1819106 | 15344.2 |
| pilus assembly protein | EYR26_RS08690 | Q87B49 | Positive | 1819117 - 1823046 | 138730.0 |
| type iv pilin protein | EYR26_RS08695 | G3XD43 | Positive | 1823059 - 1823508 | 15896.9 |
| Trna-asn | Not Available | Not Available | Positive | 1823561 - 1823637 | Not Available |
| paar domain-containing protein | EYR26_RS08980 | Not Available | Negative | 1859283 - 1859693 | 14015.8 |
| duf4123 domain-containing protein | EYR26_RS08985 | Not Available | Positive | 1860739 - 1861665 | 33740.4 |
| t6ss effector bth_i2691 family protein | EYR26_RS08990 | Not Available | Positive | 1861662 - 1864496 | 103385.0 |
| putative type vi secretion system effector | EYR26_RS08995 | Not Available | Positive | 1864519 - 1865271 | 27518.6 |
| dipeptidase | EYR26_RS09000 | Not Available | Positive | 1865289 - 1865822 | 19582.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

