Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grx4 family monothiol glutaredoxin | EYR26_RS08630 | P0AC71 | Positive | 1807953 - 1808273 | 12001.6 |
| sdr family nad(p)-dependent oxidoreductase | EYR26_RS08635 | Not Available | Positive | 1808270 - 1809013 | 25359.3 |
| yhgn family naat transporter | EYR26_RS08640 | P67144 | Positive | 1809010 - 1809609 | 21645.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1809678 - 1809754 | Not Available |
| tonb-dependent receptor | EYR26_RS08650 | P38370 | Positive | 1810380 - 1813574 | 116473.0 |
| nucleotide 5'-monophosphate nucleosidase ppnn | EYR26_RS08655 | P0ADS0 | Positive | 1813681 - 1815066 | 50682.1 |
| tfp pilus assembly protein fimt/fimu | EYR26_RS08660 | Not Available | Positive | 1815236 - 1815751 | 17893.3 |
| type iv pilus modification protein pilv | EYR26_RS08665 | Not Available | Positive | 1815748 - 1816224 | 17301.6 |
| dipeptidase | EYR26_RS08670 | Not Available | Positive | 1816221 - 1816754 | 18799.7 |
| is3 family transposase | EYR26_RS08675 | Not Available | Positive | 1816822 - 1817924 | 42271.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

