Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosome-binding factor rbfa | EYR26_RS08580 | Q2P0X2 | Positive | 1798656 - 1799048 | 14395.9 |
| trna pseudouridine(55) synthase trub | EYR26_RS08585 | Q2P0X3 | Positive | 1799128 - 1800054 | 32480.3 |
| 30s ribosomal protein s15 | EYR26_RS08590 | Q8PJ58 | Positive | 1800211 - 1800471 | 10097.3 |
| polyribonucleotide nucleotidyltransferase | EYR26_RS08595 | Q2P0X5 | Positive | 1800638 - 1802752 | 75453.0 |
| duf2272 domain-containing protein | EYR26_RS08600 | Not Available | Negative | 1803123 - 1804163 | 36965.1 |
| carboxylating nicotinate-nucleotide diphosphorylase | EYR26_RS08605 | P30819 | Negative | 1804227 - 1805114 | 31477.0 |
| trm112 family protein | EYR26_RS08610 | Not Available | Negative | 1805111 - 1805380 | 9712.73 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | EYR26_RS08615 | P72157 | Positive | 1805439 - 1805942 | 17165.8 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | EYR26_RS08620 | P72158 | Positive | 1805939 - 1807084 | 40176.9 |
| superoxide dismutase | EYR26_RS08625 | P0A2F5 | Negative | 1807236 - 1807814 | 21684.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

