Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas oryzae |
| Strain | strain NCPPB4346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892004 bp
Thymine Count
893262 bp
Guanine Count
1582493 bp
Cytosine Count
1581815 bp
Genome Length
4949574 bp
Protein-coding Genes
4236 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | EYR26_RS08320 | Not Available | Positive | 1746171 - 1747547 | 52233.7 |
| is30 family transposase | EYR26_RS08325 | Not Available | Negative | 1747626 - 1748642 | 38596.4 |
| helicase hera-like domain-containing protein | EYR26_RS08335 | P39342 | Negative | 1749152 - 1750657 | 53660.8 |
| transglycosylase slt domain-containing protein | EYR26_RS08345 | Not Available | Positive | 1750952 - 1752535 | 57066.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1752934 - 1753009 | Not Available |
| archaetidylserine decarboxylase | EYR26_RS08355 | Q2P0T0 | Negative | 1753078 - 1753926 | 30726.1 |
| sco family protein | EYR26_RS08360 | P47206 | Negative | 1753923 - 1754573 | 23291.1 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | EYR26_RS08365 | Q8P7Q8 | Positive | 1754654 - 1755580 | 33711.0 |
| chorismate synthase | EYR26_RS08370 | Q2P0T3 | Positive | 1755591 - 1756694 | 39097.4 |
| d-glycerate dehydrogenase | EYR26_RS08375 | B6YWH0 | Positive | 1756687 - 1757760 | 37426.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

